My vote here.
Legend of Mana: greatest system of item crafting. Fuck Yeah~. Cutesy anime style could be a detriment to edgy Codexers, but it's one o f few games you can play with your GF/wife/children/younger relatives/targets.
Chrono Cross is better than Trigger. Better music, wider world, much bigger selection of characters to choose. More interesting battle system. I think its story is better than Trigger, but then I am the minority in doing so. I never complete Chrono Trigger as I could never understand why when I can play Cross. It's not bad precisely, or boring, it's just overshadowed by Cross.
Parasite Eve 2 as opposed to PE1 which is one boring blocky rpg games. You can skip 1 with no regret. PE2 is... repeatable. Gun/ammo/spell management. Nice game with occasional look of Aya Breia.
Front Mission 3 is pretty good, as far as mecha games go. Turnbased, Squadbased, tactical combat games. You can even scavenge the suits from battlefield, Buy, sell, swap around... The Japanese style of characters ruin the game for some storyfags, but really, what kind of gamers turned off by one bad aspect in an otherwise great game?
Valkyrie Profile is interesting. It's pretty hard to describe its combat system. Its story is complicated in its simplicity: A Valkyrie come down to Midgard to harvest heroes' soul as eihenjar to send them to Asgard as soldier in preparation for the Final War of Gods. The missions and quests are mostly concerning with the heroes and heroines and their death. You are facing a choice of sending up your minions in exchange for a few trinkets, or keep them. And if sending up, its better to send certain characters with certain skills than others. Normally there's two endings, but the way you send up hereos can open up another, True, ending. it's a game of choice and consequence with an engaging multitude of character's lifestory. I havent played VP2 but rumours say it's not very good and certainly not as good as 1.
ROTK10 count because you can train your main character the way you like it. A wimpy clerk into the greatest general? Can do. And quests. Muthafuka quests galore. All that beside the command and control battles, of course. It's a crying shame it doesnt have a PC port to fit the classification. Same idea with SW2E but not SW2X, though a bigger stretch there.
FFS. If you list FF8. Then it's in. Top 3 of console RPG. Best one of the entire iconic series.
FF9 is worse than 8, but better than 7.
Harvest Moon is pretty good. Same attraction as LoM above, but it doesnt have battles. Definitely fit for playing with children and your other half.
Recettear An Item Shop Tale. Cutesy anime art style to kill you all, but Recettear is much more than that. It's about larping an item shop owner, you know, the npc class that infest gameworlds that oh so mundane but so very necessary for your heroes. You are larping a cute shopkeeper and always have to make decision: keep this item to sell for money to pay for your humongous debt, or equip it for dungeon delving. You choose one in a selected group of heroes frequented your shops to help you in your trek gathering items. Anyway, if you can not even get beyond the cutesy look, Reccettear is not a game for you.
Add Chrono Trigger to the list because.
ROTK6. Old game, pretty interesting in its time.
Dynasty Warriors 5 Empire. I like to create a heroine and try to get her advance in the chaotic era of 3 Kingdoms.